An atomic model of the outer layer of the bluetongue virus core derived from X-ray crystallography and electron cryomicroscopy

BACKGROUND: Bluetongue virus (BTV), which belongs to the Reoviridae family and orbivirus genus, is a non-enveloped, icosahedral, double-stranded RNA virus. Several protein layers enclose its genome; upon cell entry the outer layer is stripped away leaving a core, the surface of which is composed of VP7. The structure of the trimeric VP7 molecule has previously been determined using X-ray crystallography. The articulated VP7 subunit consists of two domains, one which is largely alpha-helical and the other, smaller domain, is a beta barrel with jelly-roll topology. The relative orientations of these two domains vary in different crystal forms. The structure of VP7 and the organizations of 780 subunits of this molecule in the core of virus is central to the assembly and function of BTV. RESULTS: A 23 A resolution map of the core, determined using electron cryomicroscopy (cryoEM) data, reveals that the 260 trimers of VP7 are organized on a rather precise T = 13 laevo icosahedral lattice, in accordance with the theory of quasi-equivalence. The VP7 layer occupies a shell that is between 260 A and 345 A from the centre of the core. Below this radius (230-260 A) lies the T = 1 layer of 120 molecules of VP3. By fitting the X-ray structure of an individual VP7 trimer onto the cryoEM BTV core structure, we have generated an atomic model of the VP7 layer of BTV. This demonstrates that one of the molecular structures seen in crystals of the isolated VP7 corresponds to the in vivo conformation of the molecule in the core. CONCLUSIONS: The beta-barrel domains of VP7 are external to the core and interact with protein in the outer layer of the mature virion. The lower, alpha-helical domains of VP7 interact with VP3 molecules which form the inner layer of the BTV core. Adjacent VP7 trimer-trimer interactions in the T = 13 layer are mediated principally through well-defined regions in the broader lower domains, to form a structure that conforms well with that expected from the theory of quasi-equivalence with no significant conformational changes within the individual trimers. The VP3 layer determines the particle size and forms a rather smooth surface upon which the two-dimensional lattice of VP7 trimers is laid down.     

Priority-based joint EDF–RM scheduling algorithm for individual real-time task on distributed systems

The Journal of Supercomputing - Multiple tasks arrive in the distributed systems that can be executed in either parallel or sequential manner. Before the execution, tasks are scheduled prioritywise...     

Consensus-based data replication protocol for distributed cloud

The Journal of Supercomputing - Data availability ensures efficient data accessibility by the readers anytime and from anywhere. It can be addressed by creating multiple copies of each data file...     

Parallel heap: An optimal parallel priority queue

We describe a new parallel data structure, namely parallel heap, for exclusive-read exclusive-write parallel random access machines. To our knowledge, it is the first such data structure to efficiently implement a truly parallel priority queue based on a heap structure. Employing p processors, the parallel heap allows deletions of (p) highest priority items and insertions of (p) new items, each in O(log n) time, where n is the size of the parallel heap. Furthermore, it can efficiently utilize processors in the range 1 through n.This work was supported by U.S. Army's PM-TRADE contract N61339-88-g-0002, Florida High Technology and Industry grant 11-28-716, and Georgia State University's internal research support during spring and summer quarters, 1991.     

Influence of Montmorillonite Clay Content on Thermal,Mechanical, Water Absorption and Biodegradability Properties of Treated Kenaf Fiber/ PLA-Hybrid Biocomposites

Silicon - Nowadays, the starring attentions of the polylactic acid based composites are improved due to environmental awareness and diminution of petroleum oil. The bio-plastics were restricted to...     

STUDY ON THE TENSILE FATIGUE DAMAGE OF QUASI—ISOTROPIC COMPOSITE LAMINATES

Quasi-isotropic. laminates have isotropic elastic properties in all in-plane directions. Therefore, this kind of laminate is widely used for structural elements. The simplest stacking sequence of quasi-isotropic laminates is [0/-60/60]s. When the direction of applied axial load to [0/-60/60]s laminate is inclined at a 30-degree angle, we have the other quasi-isotropic laminate [30/-30/90]s under axial load. The failure mechanisms of these two laminates are, however, entirely different from each other because these two laminates have different distribution of the interlaminar stresses. It was confirmed by tensile fatigue tests that the [0/-60/60]s laminate does not show any visible fatigue damage, but the [30/-30/90]s laminate develops edge-delamination during cyclic loading. The analytical results were in good agreement with the experimental results.     

Mussoorrie rock phosphate-pyrite mixture as phosphate fertilizer

Mussoorrie rock phosphate (MRP), MRP + pyrite (25% by weight), diammonium phosphate (DAP), ammonium polyphosphate (APP) and nitrophosphate (NP) were compared in a field experiment as fertilizers for wheat. At 20 kg P ha^–1, MRP was only 6 per cent as effective as DAP. However, when it was mixed with pyrite, the efficiency of MRP increased to 64 per cent at 20 kg P ha^–1 compared with 97 per cent at 40 kg P ha^–1. The P requirement for a targeted yield for 4.5 t ha^–1 decreased from 39.4 kg P ha^–1 as MRP to 23.7 kg P ha^–1 as MRP + pyrite. Of the other P fertilizers studied, NP was as effective as DAP, whereas APP was 9 to 37 per cent more effective than DAP. However, the P requirement as DAP, NP and APP for a targeted yield of 4.5 t ha^–1 was similar (11 ± 0.5 kg P ha^–1).     

Analysis of the diffusion layer thickness, equivalent circuit and conductance behaviour for reversible electron transfer processes in linear sweep voltammetry

The parametric dependence of the diffusion layer thickness upon electrode potential and scan rate has been derived for reversible electron transfer processes in linear sweep voltammetry (LSV) using a simple analytical expression for the dimensionless current function. The quantitative variation of the conductance with potential and scan rate has been illustrated and the equivalent circuit pertaining to LSV has been proposed. Several earlier results pertaining to potential step experiments, thin layer voltammetry, surface bound LSV, radial flow at micro-ring electrodes, etc. are shown to arise from the general expression for the current function obtained here, thus indicating an isomorphism among various potential perturbation techniques.     

BUBBLE TEMPERATURES OF THE BINARY MIXTURES OF 1,2-DIMETHYLBENZENE WITH 2-PROPANOL, 1-BUTANOL, 2-BUTANOL, 2-METHYLPROPAN-1-OL AND 2-METHYLPROPAN-2-OL AT 95 kPa

Bubble temperatures at 95 kPa over the entire composition range are measured for the five binary systems formed by 1,2-dimethylbenzene with 2-propanol, 1-butanol, 2-butanol, 2- methylpropan-1-ol, and 2-methylpropan- 2-ol. A Swietoslawski - type ebulliometer was used for the measurements. The composition versus temperature measurements are well represented by the Wilson model.